|
|

| Education |
| 1992 |
|
Ph.D. |
|
Molecular Genetics |
|
The Ohio State University, Columbus, OH |
| 1984 |
|
B.S. |
|
Genetics |
|
The Ohio State University, Columbus, OH |
| Professional Experience |
| 2005- PRES |
Associate Center Director, Center for Gene Therapy, The Research Institute at Nationwide Children's Hospital, Columbus, OH |
| 2002- PRES |
Associate Professor, Department of Pediatrics, Division of Molecular Medicine, The Ohio State University, Columbus, OH |
| 1997- PRES |
Director, Viral Vector Core Facility, The Research Institute at Nationwide Children's Hospital, Columbus, OH |
| 1997- PRES |
Assistant Professor, Department of Pediatrics, Division of Molecular Medicine, The Ohio State University, Columbus, OH |
| 1997- 2002 |
Assistant Professor , Department of Pediatrics and Molecular Virology and Molecular Genetics, Division of Molecular Medicine, The Ohio State University, Columbus, OH |
| 1992- 1996 |
Post-Doctoral Fellow, Laboratory of Philip R. Johnson, M.D., Department of Pediatrics, Division of Molecular Medicine, The Ohio State University, Columbus, OH |
| 1988- 1990 |
Lecturer, Introductory Genetics, The Ohio State University, Columbus, OH |
| 1986- 1990 |
Graduate Teaching Assistant in Molecular Genetics, The Ohio State University, Columbus, OH |
Research Interests
My laboratory is interested in utilizing recombinant adeno-associated virus mediated (rAAV) gene transfer to develop meaningful treatments for genetic and infectious diseases. Current research focuses on three principle areas: (i) use of antibody gene transfer as a means to augment host immunity; (ii) use of RNA based anti-sense therapeutics to achieve exon-skipping of the dystrophin gene for treatment of DMD; and (iii) development of scalable rAAV production platforms using novel AAV serotypes to support clinical trials. Antibody gene transfer: The focus of this project is to develop AAV delivery vectors that efficiently express antibodies of predetermined specificity within host tissue. Because of the inherent flexibility of this system, light and heavy chain antibody genes can be incorporated into a single rAAV vector, and the antibody-expressing vector can then be used to transduce target tissue in vivo (muscle, liver, and pleural cavity). This in turn, leads to sustained expression of biologically active antibody molecules in the circulation. We have shown that human anti-HIV-1 monoclonal antibodies can be expressed in mice and non-human primates – endowing the host with anti-HIV-1 in vitro neutralization activity. Thus, this approach allows for predetermination of antibody affinity and specificity prior to "immunization", and avoids the need for an active humoral immune response. Beyond the current application for HIV-1 infection, this strategy might be useful for other situations where antibodies with predetermined specificities need to be delivered in vivo. Currently, we are evaluating methods to further augment in vivo levels using various AAV serotypes and routes of delivery. Exon-Skipping: The goal of this project is to develop a meaningful therapy to treat muscular dystrophy caused by mutations within the dystrophin gene that ablate the reading frame. We have constructed several rAAV gene transfer vectors that express anti-sense splice sequences linked to a modified U7 small nuclear RNA (snRNA). Expression of these RNAs block inclusion of the mutated dystrophin exon into the mRNA transcript. This results in the generation of a functional (albeit slightly smaller) dystrophin mRNA and protein product. Currently, we are evaluating exonic splice enhancers (ESEs) as potential targets for efficient skipping and methods of vascular delivery to the muscles of the lower limbs. Lastly, we are developing scalable production and purification methods using stable cell lines and transient transfection technologies for the production of multiple AAV serotypes (1-9). Current research has focused on developing a cGMP “friendly” approach to large-scale production that can be transitioned into our production facility upon its completion.
|
CLARK LABORATORY STAFF
|
Principal Investigator:
K. Reed Clark, Ph.D.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Selected Publications |
| Clark, K. R., and S. T. Walsh Dec 2009, posting date. Crystal structure of a 3B3 variant--a broadly neutralizing HIV-1 scFv antibody 2009/09/29. PubMed ID: 19785005 |
Johnson, P. R., B. C. Schnepp, J. Zhang, M. J. Connell, S. M. Greene, E. Yuste, R. C. Desrosiers, and K. R. Clark. 2009. Vector-mediated gene transfer engenders long-lived neutralizing activity and protection against SIV infection in monkeys. Nat Med 15:901-6. PubMed ID: 19448633 |
Kota, J., R. R. Chivukula, K. A. O'Donnell, E. A. Wentzel, C. L. Montgomery, H. W. Hwang, T. C. Chang, P. Vivekanandan, M. Torbenson, K. R. Clark, J. R. Mendell, and J. T. Mendell. 2009. Therapeutic microRNA delivery suppresses tumorigenesis in a murine liver cancer model. Cell 137:1005-17. PubMed ID: 19524505 |
Martin, P. T., R. Xu, L. R. Rodino-Klapac, E. Oglesbay, M. Camboni, C. L. Montgomery, K. Shontz, L. G. Chicoine, K. R. Clark, Z. Sahenk, J. R. Mendell, and P. M. Janssen. 2009. Overexpression of Galgt2 in skeletal muscle prevents injury resulting from eccentric contractions in both mdx and wild-type mice. Am J Physiol Cell Physiol 296:C476-88. PubMed ID: 19109526 |
Mendell, J. R., L. R. Rodino-Klapac, X. Rosales-Quintero, J. Kota, B. D. Coley, G. Galloway, J. M. Craenen, S. Lewis, V. Malik, C. Shilling, B. J. Byrne, T. Conlon, K. J. Campbell, W. G. Bremer, L. Viollet, C. M. Walker, Z. Sahenk, and K. R. Clark. 2009. Limb-girdle muscular dystrophy type 2D gene therapy restores alpha-sarcoglycan and associated proteins. Ann Neurol 66:290-7. PubMed ID: 19798725 |
Rodino-Klapac, L. R., C. L. Montgomery, W. G. Bremer, K. M. Shontz, V. Malik, N. Davis, S. Sprinkle, K. J. Campbell, Z. Sahenk, K. R. Clark, C. M. Walker, J. R. Mendell, and L. G. Chicoine. 2009. Persistent Expression of FLAG-tagged Micro dystrophin in Nonhuman Primates Following Intramuscular and Vascular Delivery. Mol Ther. PubMed ID: 19904237 |
Schnepp, B. C., R. L. Jensen, K. R. Clark, and P. R. Johnson. 2009. Infectious molecular clones of adeno-associated virus isolated directly from human tissues. J Virol 83:1456-64.
PubMed ID: 19019948 |
| Mendell JR, Clark KR (2006). Challenges for gene therapy for muscular dystrophy. Curr neurol Neurosci Rep. 6(1):47-56. PubMed ID: 16469271 |
| Schnepp BC, Jensen RL, Chen CL, Johnson PR, Clark KR (2005). Characterization of adeno-associated virus genomes isolated from human tissues. Journal of Virology 79(23):14793-803. PubMed ID: 16282479 |
| Johnson PR, Schnepp BC, Connell MJ, Rohne D, Robinson S, Krivulka GR, Lord CI, Zinn R, Montefiori DC, Letvin NL, and Clark KR (2005). Novel Adeno-Associated Virus Vector Vaccine Restricts Replication of Simian Immunodeficiency Virus in Macaques. Journal of Virology 79, 955–965. PubMed ID: 15613324 |
| Chen CL, Jensen RL, Schnepp BC, Connell MJ, Shell R, Sferra TJ, Bartlett JS, Clark KR, Johnson PR (2005). Molecular characterization of adeno-associated viruses infection children. Journal of Virology 79(23):14781-92. PubMed ID: 16282478 |
| Johson PR, Schnepp BC, Connell MJ, Rohne D, Robinson S, Krivulka GR, Lord CI, Zinn R, Montefiori DC, Letvin NL, Clark KR (2005). Novel adeno-associated virus vector vaccine restricts replication of simian immunodeficiency virus in macaques. Journal of Virology 79(2):955-65. PubMed ID: 15613324 |
| van den Pol AN, Acuna-Goycolea C, Clark KR, Ghosh PK (2004). Physiological Properties of Hypothalamic MCH Neurons Identified with Selective Expression of Reporter Gene after Recombinant Virus Infection. Neuron 42, 635-652. PubMed ID: 15157424 |
| Schnepp BC, Clark KR, Klemanski DL, Pacak CA, and Johnson PR (2003). Genetic fate of recombinant adeno-associated virus vector genomes in muscle. Journal of Virology 77, 3495-3504. PubMed ID: 12610125 |
| Wang C, Wang CM, Clark KR, and Sferra TJ (2003). Recombinant AAV Serotype 1 Transduction Efficiency and Tropism in the Murine Brain. Gene Therapy 10, 1528-1534. PubMed ID: 12900769 |
| Lewis A, Chen R, Montefiori DC, Johnson PR, and Clark KR. (2002). Generation of Neutralizing Activity Against Human Immunodeficiency Virus Type 1 (HIV-1) in serum by Antibody Gene Transfer. Journal of Virology 76:8769-8775. PubMed ID: 12163597 |
| Clark KR, Liu X, McGrath JP, and Johnson PR (1999). Highly Purified Recombinant Adeno-associated Virus Vectors are Biologically Active and Free of Detectable Wild-Type Viruses. Human Gene Therapy 10, 1031-1039. PubMed ID: 10223736 |
Clark KR, Voulgaropoulou F, and Johnson PR (1996). A stable cell line carrying adenovirus-inducible rep and cap genes allows for infectivity titration of adeno-associated virus vectors. Gene Therapy 3, 1124-1132. PubMed ID: 8986439 |
|